Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 MIR600HG-201ENST00000449175 5984 ntBASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MBD3L1Q8WWY6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TSPY7P-201ENST00000431358 1114 ntBASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AC091167.2-201ENST00000579581 588 ntBASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 ITM2C-210ENST00000620962 501 ntBASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 C18orf15-201ENST00000623680 2534 ntBASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MBD3L1Q8WWY6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 AC131009.4-201ENST00000624048 1740 ntBASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MBD3L1Q8WWY6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms