Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF3IP1Q8TDR0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF3IP1Q8TDR0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 AC140658.5-201ENST00000438532 169 ntBASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 KRT19P2-202ENST00000557173 1012 ntBASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 AL592424.1-201ENST00000563624 1536 ntBASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF3IP1Q8TDR0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AC024909.3-201ENST00000611513 2257 ntBASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 RNA5SP416-201ENST00000516838 111 ntBASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AL078644.1-201ENST00000609881 752 ntBASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AC120114.3-201ENST00000611923 658 ntBASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF3IP1Q8TDR0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms