Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 AC024909.3-201ENST00000611513 2257 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TUBB8P12-201ENST00000308911 1335 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TUBB7P-202ENST00000428444 1305 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 TUBB8P7-204ENST00000567960 1332 ntBASIC13.89□□□□□ -0.19
CLDND2Q8NHS1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 AL662844.4-201ENST00000606367 2838 ntBASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SPDYE7P-202ENST00000420373 878 ntBASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SPDYE14P-201ENST00000442619 822 ntBASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 KLF2P3-201ENST00000451977 1087 ntBASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 AC051619.7-201ENST00000568314 623 ntBASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDND2Q8NHS1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 AC125807.1-201ENST00000483097 614 ntBASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 AC093214.1-201ENST00000511688 1107 ntBASIC13.87□□□□□ -0.19
CLDND2Q8NHS1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms