Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
COMMD1Q8N668 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD1Q8N668 AC138035.3-201ENST00000622706 2791 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 AC092910.1-201ENST00000482027 1129 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 AC004706.3-202ENST00000621574 984 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 AC117500.6-201ENST00000624871 588 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 AP005117.1-202ENST00000581724 1908 ntBASIC13.6□□□□□ -0.23
COMMD1Q8N668 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD1Q8N668 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD1Q8N668 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 AC243591.1-201ENST00000452967 1364 ntBASIC13.59□□□□□ -0.23
COMMD1Q8N668 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD1Q8N668 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 ACTG1P4-201ENST00000425123 1122 ntBASIC13.59□□□□□ -0.23
COMMD1Q8N668 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD1Q8N668 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms