Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHTF2Q8N3S3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHTF2Q8N3S3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 HLA-V-204ENST00000476601 1289 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC239800.4-201ENST00000603712 296 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AC007950.2-201ENST00000615045 2347 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AL596257.1-201ENST00000641463 2694 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 AL139011.1-202ENST00000642063 584 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.83■□□□□ 0.28
PHTF2Q8N3S3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 AC098859.1-201ENST00000502915 1238 ntBASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 AC092364.2-201ENST00000596710 2692 ntBASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHTF2Q8N3S3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHTF2Q8N3S3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms