Protein–RNA interactions for Protein: Q8N0V3

RBFA, Putative ribosome-binding factor A, mitochondrial, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFAQ8N0V3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AL035633.1-201ENST00000406139 838 ntBASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AC142381.1-201ENST00000426099 345 ntBASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 IGHV3-42-201ENST00000520410 361 ntBASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AC140878.1-201ENST00000565277 250 ntBASIC16.31■□□□□ 0.2
RBFAQ8N0V3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AL390754.1-201ENST00000619088 582 ntBASIC16.31■□□□□ 0.2
RBFAQ8N0V3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFAQ8N0V3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 INGX-202ENST00000489074 768 ntBASIC16.3■□□□□ 0.2
RBFAQ8N0V3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 MIR4453-201ENST00000584019 89 ntBASIC16.3■□□□□ 0.2
RBFAQ8N0V3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 U82695.1-201ENST00000635752 1889 ntBASIC16.3■□□□□ 0.2
RBFAQ8N0V3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 AC006449.6-201ENST00000612330 2296 ntBASIC16.3■□□□□ 0.2
RBFAQ8N0V3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFAQ8N0V3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.29■□□□□ 0.2
RBFAQ8N0V3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.29■□□□□ 0.2
RBFAQ8N0V3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFAQ8N0V3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms