Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 TCAF1P1-201ENST00000414990 2232 ntBASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 IGHGP-201ENST00000390555 1178 ntBASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 HLA-L-209ENST00000420110 1011 ntBASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 AL353692.3-201ENST00000407031 1396 ntBASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CROCCP3Q8IVE0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 CICP17-201ENST00000418553 2377 ntBASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 HMGA1P5-201ENST00000412453 271 ntBASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 AL049757.1-201ENST00000616842 1596 ntBASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 AL671710.1-201ENST00000610245 2349 ntBASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 AL356585.2-201ENST00000625078 2396 ntBASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CROCCP3Q8IVE0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CROCCP3Q8IVE0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms