Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK3Q8IV63 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 MIR648-201ENST00000385046 94 ntBASIC15.87■□□□□ 0.13
VRK3Q8IV63 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC024267.1-201ENST00000582320 895 ntBASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC079781.4-201ENST00000641908 219 ntBASIC15.87■□□□□ 0.13
VRK3Q8IV63 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC008894.3-201ENST00000624324 3103 ntBASIC15.87■□□□□ 0.13
VRK3Q8IV63 AC008677.1-201ENST00000519230 1561 ntBASIC15.87■□□□□ 0.13
VRK3Q8IV63 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK3Q8IV63 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK3Q8IV63 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LINC02447-202ENST00000501888 2146 ntBASIC15.86■□□□□ 0.13
VRK3Q8IV63 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 AC069224.1-201ENST00000566372 1715 ntBASIC15.86■□□□□ 0.13
VRK3Q8IV63 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 LINC00628-201ENST00000628516 1289 ntBASIC15.86■□□□□ 0.13
VRK3Q8IV63 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK3Q8IV63 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK3Q8IV63 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK3Q8IV63 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
VRK3Q8IV63 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK3Q8IV63 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK3Q8IV63 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK3Q8IV63 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK3Q8IV63 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms