Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
FAM90A1Q86YD7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AC022188.1-201ENST00000620960 1664 ntBASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 HAUS4P1-201ENST00000406739 1145 ntBASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 GPS2P2-201ENST00000430745 888 ntBASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
FAM90A1Q86YD7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 FAM220BP-201ENST00000377689 816 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 HLA-H-201ENST00000383620 1096 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 RBPMS2P1-201ENST00000437762 623 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 ALG1L8P-201ENST00000533887 760 ntBASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM90A1Q86YD7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms