Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 AL390755.1-201ENST00000623716 2027 ntBASIC13.6□□□□□ -0.23
ZNF546Q86UE3 AC073912.3-201ENST00000624414 853 ntBASIC13.6□□□□□ -0.23
ZNF546Q86UE3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF546Q86UE3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AL353692.3-201ENST00000407031 1396 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AL031731.1-201ENST00000642131 2094 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 HLA-F-220ENST00000434407 884 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AP003733.1-201ENST00000491725 852 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC140113.3-201ENST00000605663 199 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC079602.3-201ENST00000623931 403 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AL031432.5-201ENST00000641059 760 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC005912.2-201ENST00000619492 2400 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AC013726.1-201ENST00000563747 2285 ntBASIC13.59□□□□□ -0.23
ZNF546Q86UE3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF546Q86UE3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 AC015656.1-201ENST00000624209 3578 ntBASIC13.58□□□□□ -0.24
ZNF546Q86UE3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 AC067750.1-201ENST00000608826 6545 ntBASIC13.58□□□□□ -0.24
ZNF546Q86UE3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF546Q86UE3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms