Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 TSPY19P-201ENST00000418461 509 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 LAGE3P1-201ENST00000425356 484 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 TSPY18P-201ENST00000441642 509 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 AC010654.1-201ENST00000615722 808 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 GGTLC5P-201ENST00000617623 998 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 REXO1L6P-202ENST00000619970 1078 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHFQ7M4L6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.78□□□□□ -0.04
SHFQ7M4L6 AC022532.1-201ENST00000624563 1728 ntBASIC14.78□□□□□ -0.04
SHFQ7M4L6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 AL353732.1-201ENST00000569618 1459 ntBASIC14.77□□□□□ -0.04
SHFQ7M4L6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SHFQ7M4L6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SHFQ7M4L6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 SLC25A6P2-201ENST00000497974 877 ntBASIC14.77□□□□□ -0.05
SHFQ7M4L6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 PRELID1P1-202ENST00000567272 903 ntBASIC14.77□□□□□ -0.05
SHFQ7M4L6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHFQ7M4L6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHFQ7M4L6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHFQ7M4L6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHFQ7M4L6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHFQ7M4L6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SHFQ7M4L6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.76□□□□□ -0.05
SHFQ7M4L6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHFQ7M4L6 SAPCD2P3-201ENST00000455031 850 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms