Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC093909.1-201ENST00000504731 1122 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AL589182.2-201ENST00000619332 1049 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC008735.5-201ENST00000623544 497 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AC116407.3-201ENST00000623905 1129 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 CICP13-201ENST00000422015 2789 ntBASIC15.11■□□□□ 0.01
TUBA1AQ71U36 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TUBA1AQ71U36 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 RPS2P28-201ENST00000314255 741 ntBASIC15.1■□□□□ 0.01
TUBA1AQ71U36 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 AC105339.3-201ENST00000560043 636 ntBASIC15.1■□□□□ 0.01
TUBA1AQ71U36 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 AC120114.3-201ENST00000611923 658 ntBASIC15.1■□□□□ 0.01
TUBA1AQ71U36 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TUBA1AQ71U36 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 GPR89P-201ENST00000407924 1495 ntBASIC15.09■□□□□ 0.01
TUBA1AQ71U36 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TUBA1AQ71U36 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms