Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00299Q6ZSB3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 AC027612.1-201ENST00000445234 2395 ntBASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 DGCR9-201ENST00000609630 2415 ntBASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00299Q6ZSB3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AC005622.1-201ENST00000636801 1703 ntBASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 HBZP1-201ENST00000354915 429 ntBASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AL136038.4-201ENST00000603606 1261 ntBASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00299Q6ZSB3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms