Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 USE1-206ENST00000595101 1776 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 BAATP1-201ENST00000412284 1225 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 FAM21FP-201ENST00000426241 1131 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AC022137.2-201ENST00000503482 481 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 FAM8A2P-201ENST00000528813 1142 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 CMC2-214ENST00000565925 640 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AC009486.1-201ENST00000569860 813 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 DERL2-202ENST00000570848 657 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AC015910.1-201ENST00000579400 975 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 MIR6787-201ENST00000616675 61 ntBASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AGER-206ENST00000375070 1463 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC141Q6ZP82 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 AC099548.2-209ENST00000480264 625 ntBASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 KRT8P44-201ENST00000441609 1350 ntBASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC141Q6ZP82 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 TP73-209ENST00000603362 1668 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC141Q6ZP82 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 BRF1-202ENST00000379932 884 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 AC108725.1-201ENST00000495472 409 ntBASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 AP001063.1-201ENST00000568332 529 ntBASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC141Q6ZP82 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC026410.3-201ENST00000514280 936 ntBASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 RIT1-205ENST00000539040 919 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC009542.2-202ENST00000619004 1067 ntBASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms