Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 RNPS1P1-201ENST00000507437 918 ntBASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 AL356488.2-201ENST00000602755 427 ntBASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 AC008735.5-201ENST00000623544 497 ntBASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 PGM5P2-202ENST00000637225 1043 ntBASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 CDC14C-201ENST00000428251 1719 ntBASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.92□□□□□ -0.02
SMARCD3Q6STE5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 MRPL20P1-201ENST00000400819 433 ntBASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 LINC02447-202ENST00000501888 2146 ntBASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 IFNL4P1-201ENST00000607083 540 ntBASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 AC144831.1-201ENST00000573312 2656 ntBASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.91□□□□□ -0.02
SMARCD3Q6STE5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC092850.2-201ENST00000623821 2697 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC023824.1-201ENST00000562945 2975 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC005622.1-201ENST00000636801 1703 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms