Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 AC092850.2-201ENST00000623821 2697 ntBASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 AP000842.3-202ENST00000569238 1080 ntBASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 SPTSSB-204ENST00000617024 1292 ntBASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC144NLQ6NUI1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AC092171.3-201ENST00000610122 2651 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 HLA-H-201ENST00000383620 1096 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AC004461.1-201ENST00000412461 403 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AL627223.1-201ENST00000416693 442 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AC023141.5-201ENST00000458585 616 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AC084121.4-201ENST00000641598 221 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 AF228730.8-201ENST00000642140 221 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC144NLQ6NUI1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC144NLQ6NUI1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms