Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 AZGP1P1-201ENST00000411909 902 ntBASIC16.89■□□□□ 0.29
TPGS2Q68CL5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 U91328.1-201ENST00000437528 223 ntBASIC16.89■□□□□ 0.29
TPGS2Q68CL5 ELK1P1-201ENST00000485699 580 ntBASIC16.89■□□□□ 0.29
TPGS2Q68CL5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPGS2Q68CL5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AP001282.1-201ENST00000531301 1499 ntBASIC16.88■□□□□ 0.29
TPGS2Q68CL5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AC106886.4-201ENST00000623557 2502 ntBASIC16.88■□□□□ 0.29
TPGS2Q68CL5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AL359881.2-201ENST00000602973 570 ntBASIC16.88■□□□□ 0.29
TPGS2Q68CL5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 BNIP3P1-202ENST00000550043 1585 ntBASIC16.88■□□□□ 0.29
TPGS2Q68CL5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPGS2Q68CL5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.87■□□□□ 0.29
TPGS2Q68CL5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 GPR53P-205ENST00000457298 1084 ntBASIC16.87■□□□□ 0.29
TPGS2Q68CL5 AC104596.2-201ENST00000512793 793 ntBASIC16.87■□□□□ 0.29
TPGS2Q68CL5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 CTBP2P3-201ENST00000585629 1255 ntBASIC16.87■□□□□ 0.29
TPGS2Q68CL5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPGS2Q68CL5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms