Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AGAP7P-201ENST00000582299 2062 ntBASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AGAP14-201ENST00000624701 2060 ntBASIC15.4■□□□□ 0.06
LPCAT4Q643R3 OR2I1P-210ENST00000642037 4691 ntBASIC15.4■□□□□ 0.06
LPCAT4Q643R3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.4■□□□□ 0.06
LPCAT4Q643R3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 TERC-201ENST00000602385 541 ntBASIC15.39■□□□□ 0.05
LPCAT4Q643R3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 Z83836.1-201ENST00000624605 1642 ntBASIC15.39■□□□□ 0.05
LPCAT4Q643R3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.39■□□□□ 0.05
LPCAT4Q643R3 C18orf15-201ENST00000623680 2534 ntBASIC15.39■□□□□ 0.05
LPCAT4Q643R3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LPCAT4Q643R3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LPCAT4Q643R3 RNF126P1-202ENST00000569893 925 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms