Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KHDC1Q4VXA5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 AP002414.2-201ENST00000591780 3365 ntBASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 AP002490.2-201ENST00000524791 560 ntBASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 AL512652.2-201ENST00000625156 1716 ntBASIC16.52■□□□□ 0.24
KHDC1Q4VXA5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
KHDC1Q4VXA5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 AC073347.1-201ENST00000421633 2643 ntBASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KHDC1Q4VXA5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms