Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDR1Q08345 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.93■□□□□ 0.78
DDR1Q08345 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.93■□□□□ 0.78
DDR1Q08345 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.93■□□□□ 0.78
DDR1Q08345 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.93■□□□□ 0.78
DDR1Q08345 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.93■□□□□ 0.78
DDR1Q08345 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.93■□□□□ 0.78
DDR1Q08345 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.93■□□□□ 0.78
DDR1Q08345 AP001063.1-201ENST00000568332 529 ntBASIC19.93■□□□□ 0.78
DDR1Q08345 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.93■□□□□ 0.78
DDR1Q08345 AL021578.1-201ENST00000613646 709 ntBASIC19.93■□□□□ 0.78
DDR1Q08345 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
DDR1Q08345 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DDR1Q08345 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDR1Q08345 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDR1Q08345 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 REXO1L8P-201ENST00000604378 1897 ntBASIC19.92■□□□□ 0.78
DDR1Q08345 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDR1Q08345 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.92■□□□□ 0.78
DDR1Q08345 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.92■□□□□ 0.78
DDR1Q08345 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.92■□□□□ 0.78
DDR1Q08345 RPL13AP25-201ENST00000484130 612 ntBASIC19.92■□□□□ 0.78
DDR1Q08345 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.92■□□□□ 0.78
DDR1Q08345 AC243562.2-201ENST00000561247 970 ntBASIC19.92■□□□□ 0.78
DDR1Q08345 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.92■□□□□ 0.78
DDR1Q08345 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.92■□□□□ 0.78
DDR1Q08345 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.92■□□□□ 0.78
DDR1Q08345 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDR1Q08345 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 FZD10-202ENST00000539839 3282 ntBASIC19.92■□□□□ 0.78
DDR1Q08345 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDR1Q08345 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDR1Q08345 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDR1Q08345 AC020763.4-201ENST00000623414 4170 ntBASIC19.91■□□□□ 0.78
DDR1Q08345 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DDR1Q08345 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.91■□□□□ 0.78
DDR1Q08345 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
DDR1Q08345 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.91■□□□□ 0.78
DDR1Q08345 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DDR1Q08345 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.91■□□□□ 0.78
DDR1Q08345 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.91■□□□□ 0.78
DDR1Q08345 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDR1Q08345 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.91■□□□□ 0.78
DDR1Q08345 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDR1Q08345 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
DDR1Q08345 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDR1Q08345 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.9■□□□□ 0.78
DDR1Q08345 IGHJ2P-201ENST00000454480 60 ntBASIC19.9■□□□□ 0.78
DDR1Q08345 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.9■□□□□ 0.78
DDR1Q08345 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.9■□□□□ 0.78
DDR1Q08345 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.9■□□□□ 0.78
DDR1Q08345 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.9■□□□□ 0.78
DDR1Q08345 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.9■□□□□ 0.78
DDR1Q08345 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDR1Q08345 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.89■□□□□ 0.77
DDR1Q08345 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.89■□□□□ 0.77
DDR1Q08345 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
DDR1Q08345 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDR1Q08345 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms