Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
LRP1Q07954 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 CSH2-202ENST00000345366 598 ntTSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 RN7SL555P-201ENST00000584742 339 ntBASIC9.42□□□□□ -0.9
LRP1Q07954 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC9.42□□□□□ -0.9
LRP1Q07954 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
LRP1Q07954 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
LRP1Q07954 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC9.42□□□□□ -0.9
LRP1Q07954 AP001063.1-201ENST00000568332 529 ntBASIC9.42□□□□□ -0.9
LRP1Q07954 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 AC011676.5-201ENST00000624864 2660 ntBASIC9.42□□□□□ -0.9
LRP1Q07954 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
LRP1Q07954 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 C1QBPP1-201ENST00000400117 770 ntBASIC9.42□□□□□ -0.9
LRP1Q07954 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC9.42□□□□□ -0.9
LRP1Q07954 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC9.42□□□□□ -0.9
LRP1Q07954 SCARNA20.5-201ENST00000516991 142 ntBASIC9.42□□□□□ -0.9
LRP1Q07954 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC9.42□□□□□ -0.9
LRP1Q07954 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
LRP1Q07954 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC9.42□□□□□ -0.9
LRP1Q07954 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC9.41□□□□□ -0.9
LRP1Q07954 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC9.41□□□□□ -0.9
LRP1Q07954 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
LRP1Q07954 RN7SL574P-201ENST00000581512 297 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC9.41□□□□□ -0.9
LRP1Q07954 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 DRD5P1-201ENST00000456605 1438 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 EEF1DP4-201ENST00000446006 880 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 UPF3AP2-201ENST00000457924 1132 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC9.41□□□□□ -0.9
LRP1Q07954 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC9.41□□□□□ -0.9
LRP1Q07954 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
LRP1Q07954 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 AL138709.1-201ENST00000614840 1693 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LRP1Q07954 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
LRP1Q07954 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LRP1Q07954 AC069218.1-201ENST00000435269 762 ntBASIC9.41□□□□□ -0.9
LRP1Q07954 ELP6-209ENST00000446787 894 ntTSL 3 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms