Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 GPR89P-201ENST00000407924 1495 ntBASIC14.34□□□□□ -0.11
SEC61A1P61619 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 ACTG1P4-201ENST00000425123 1122 ntBASIC14.34□□□□□ -0.11
SEC61A1P61619 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.34□□□□□ -0.11
SEC61A1P61619 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.34□□□□□ -0.11
SEC61A1P61619 AC064836.3-201ENST00000607928 673 ntBASIC14.34□□□□□ -0.11
SEC61A1P61619 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 FAM197Y3-203ENST00000618346 717 ntBASIC14.34□□□□□ -0.11
SEC61A1P61619 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC61A1P61619 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC61A1P61619 MIR600HG-201ENST00000449175 5984 ntBASIC14.34□□□□□ -0.11
SEC61A1P61619 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC61A1P61619 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC61A1P61619 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC61A1P61619 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.33□□□□□ -0.11
SEC61A1P61619 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SEC61A1P61619 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.33□□□□□ -0.11
SEC61A1P61619 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC61A1P61619 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.33□□□□□ -0.11
SEC61A1P61619 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AL591424.1-201ENST00000442569 1213 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.33□□□□□ -0.12
SEC61A1P61619 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.33□□□□□ -0.12
SEC61A1P61619 IGHV3-65-201ENST00000523210 341 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC092865.5-201ENST00000545435 363 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC008667.4-201ENST00000607370 168 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC004790.2-201ENST00000623588 572 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AL805961.1-202ENST00000641562 540 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SEC61A1P61619 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC073347.1-201ENST00000421633 2643 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 AC006538.1-201ENST00000567905 1585 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SEC61A1P61619 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 AL009178.2-201ENST00000597278 2719 ntBASIC14.33□□□□□ -0.12
SEC61A1P61619 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC61A1P61619 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEC61A1P61619 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms