Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
CKS1BP61024 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.51□□□□□ -0.57
CKS1BP61024 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CKS1BP61024 Z82170.1-201ENST00000625081 3192 ntBASIC11.51□□□□□ -0.57
CKS1BP61024 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 AC010460.3-201ENST00000511359 1579 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CKS1BP61024 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 AL365203.3-201ENST00000609742 2057 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 AC103564.2-201ENST00000432853 1299 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 SLC25A3P1-201ENST00000443844 931 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 GUSBP12-201ENST00000513727 720 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.5□□□□□ -0.57
CKS1BP61024 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.5□□□□□ -0.57
CKS1BP61024 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 AC145285.6-201ENST00000604632 637 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS1BP61024 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CKS1BP61024 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 EGFEM1P-202ENST00000431685 1563 ntBASIC11.5□□□□□ -0.57
CKS1BP61024 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS1BP61024 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS1BP61024 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS1BP61024 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS1BP61024 SPDYE15P-201ENST00000424157 909 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms