Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.73□□□□□ -0.37
ERVFC1-1P60608 LINC02447-202ENST00000501888 2146 ntBASIC12.73□□□□□ -0.37
ERVFC1-1P60608 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AC073508.3-201ENST00000619697 1419 ntBASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 NEK4P2-201ENST00000580004 1012 ntBASIC12.72□□□□□ -0.37
ERVFC1-1P60608 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.72□□□□□ -0.37
ERVFC1-1P60608 LINC00528-201ENST00000600723 2160 ntBASIC12.71□□□□□ -0.37
ERVFC1-1P60608 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 CDC14C-201ENST00000428251 1719 ntBASIC12.71□□□□□ -0.37
ERVFC1-1P60608 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 GGT3P-204ENST00000453783 1664 ntBASIC12.71□□□□□ -0.37
ERVFC1-1P60608 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ERVFC1-1P60608 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms