Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC092171.3-201ENST00000610122 2651 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 MIR661-201ENST00000384842 89 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SLC25A1P3-201ENST00000395415 828 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 AC005034.1-201ENST00000426657 489 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 AC097493.3-201ENST00000509725 367 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.64■□□□□ 0.57
CHMP4BP1P59074 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4BP1P59074 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AF228730.6-201ENST00000641497 218 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC084121.3-201ENST00000641716 218 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC105233.6-201ENST00000642093 218 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 KRT8P49-201ENST00000604166 1432 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC103702.1-201ENST00000548801 2630 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 AC132872.4-202ENST00000622924 2756 ntBASIC18.63■□□□□ 0.57
CHMP4BP1P59074 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4BP1P59074 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC092068.3-201ENST00000587894 2016 ntBASIC18.62■□□□□ 0.57
CHMP4BP1P59074 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC007950.2-201ENST00000615045 2347 ntBASIC18.62■□□□□ 0.57
CHMP4BP1P59074 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 LINC02560-201ENST00000596379 459 ntBASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP4BP1P59074 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms