Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC026150.2-201ENST00000564693 1156 ntBASIC16.72■□□□□ 0.27
ATXN3P54252 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 AL158211.3-201ENST00000607385 239 ntBASIC16.72■□□□□ 0.27
ATXN3P54252 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 AC008677.1-201ENST00000519230 1561 ntBASIC16.72■□□□□ 0.27
ATXN3P54252 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATXN3P54252 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.72■□□□□ 0.27
ATXN3P54252 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.72■□□□□ 0.27
ATXN3P54252 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 UGT1A2P-201ENST00000454886 866 ntBASIC16.71■□□□□ 0.27
ATXN3P54252 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 HLA-J-202ENST00000469281 1241 ntBASIC16.71■□□□□ 0.27
ATXN3P54252 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.71■□□□□ 0.27
ATXN3P54252 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.71■□□□□ 0.27
ATXN3P54252 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATXN3P54252 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
ATXN3P54252 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.71■□□□□ 0.27
ATXN3P54252 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.71■□□□□ 0.26
ATXN3P54252 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
ATXN3P54252 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATXN3P54252 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.7■□□□□ 0.26
ATXN3P54252 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATXN3P54252 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.7■□□□□ 0.26
ATXN3P54252 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 AC006449.5-201ENST00000610658 2098 ntBASIC16.7■□□□□ 0.26
ATXN3P54252 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.7■□□□□ 0.26
ATXN3P54252 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.7■□□□□ 0.26
ATXN3P54252 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.7■□□□□ 0.26
ATXN3P54252 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.7■□□□□ 0.26
ATXN3P54252 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.7■□□□□ 0.26
ATXN3P54252 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATXN3P54252 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.7■□□□□ 0.26
ATXN3P54252 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ATXN3P54252 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATXN3P54252 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.69■□□□□ 0.26
ATXN3P54252 GPS2P2-201ENST00000430745 888 ntBASIC16.69■□□□□ 0.26
ATXN3P54252 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.69■□□□□ 0.26
ATXN3P54252 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms