Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 VBP1-203ENST00000535916 944 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.24■□□□□ 0.19
NUBP1P53384 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NUBP1P53384 OR5AQ1P-202ENST00000641257 1534 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 OR5AQ1P-203ENST00000641818 1529 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NUBP1P53384 REXO1L9P-201ENST00000604264 2108 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.24■□□□□ 0.19
NUBP1P53384 PCDHAC2-203ENST00000615316 3011 ntBASIC16.24■□□□□ 0.19
NUBP1P53384 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.23■□□□□ 0.19
NUBP1P53384 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 RPS20P22-202ENST00000488192 1318 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 MIR326-201ENST00000362220 95 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 ZNF92P1Y-201ENST00000415010 1191 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 UBE2V2P3-201ENST00000433562 437 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.23■□□□□ 0.19
NUBP1P53384 BX284668.4-201ENST00000453917 508 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 TAAR4P-201ENST00000454843 1039 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.23■□□□□ 0.19
NUBP1P53384 FTH1P14-201ENST00000482930 551 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.23■□□□□ 0.19
NUBP1P53384 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC16.23■□□□□ 0.19
NUBP1P53384 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 MIR3619-201ENST00000579667 83 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 MIR4706-201ENST00000582134 82 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 AC096947.1-201ENST00000603233 470 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 AL008638.5-201ENST00000623814 1298 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 AC079416.3-201ENST00000624479 549 ntBASIC16.23■□□□□ 0.19
NUBP1P53384 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.23■□□□□ 0.19
NUBP1P53384 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
NUBP1P53384 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NUBP1P53384 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 SOCS2P1-201ENST00000417727 557 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 AC026954.1-201ENST00000429771 1293 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.22■□□□□ 0.19
NUBP1P53384 Z93015.1-201ENST00000451718 390 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC16.22■□□□□ 0.19
NUBP1P53384 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC16.22■□□□□ 0.19
NUBP1P53384 COL6A4P2-205ENST00000509855 506 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.22■□□□□ 0.19
NUBP1P53384 AC005412.1-201ENST00000580812 1049 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.22■□□□□ 0.19
NUBP1P53384 AC020914.3-201ENST00000594712 304 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 SPCS2P2-201ENST00000603270 608 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 AC239803.2-201ENST00000610161 430 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 AC021766.1-201ENST00000624404 741 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.22■□□□□ 0.19
NUBP1P53384 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NUBP1P53384 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.22■□□□□ 0.19
NUBP1P53384 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms