Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 AC079776.4-201ENST00000511039 504 ntBASIC14.46□□□□□ -0.09
SLC25A1P53007 RNA5SP419-201ENST00000515908 135 ntBASIC14.46□□□□□ -0.09
SLC25A1P53007 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC25A1P53007 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SLC25A1P53007 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC25A1P53007 AC020658.6-201ENST00000623564 1870 ntBASIC14.46□□□□□ -0.1
SLC25A1P53007 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SLC25A1P53007 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 MST1L-201ENST00000442552 2185 ntBASIC14.46□□□□□ -0.1
SLC25A1P53007 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC25A1P53007 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC25A1P53007 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC25A1P53007 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SLC25A1P53007 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC25A1P53007 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC25A1P53007 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC25A1P53007 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC25A1P53007 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 PMS2P7-201ENST00000506558 1336 ntBASIC14.44□□□□□ -0.1
SLC25A1P53007 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SLC25A1P53007 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SLC25A1P53007 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SLC25A1P53007 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC25A1P53007 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC25A1P53007 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC25A1P53007 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
SLC25A1P53007 AP001005.1-201ENST00000571755 1248 ntBASIC14.44□□□□□ -0.1
SLC25A1P53007 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC25A1P53007 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms