Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 AL645728.1-201ENST00000366221 2101 ntBASIC15.79■□□□□ 0.12
PDX1P52945 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PDX1P52945 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 MTND6P24-201ENST00000440466 518 ntBASIC15.79■□□□□ 0.12
PDX1P52945 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PDX1P52945 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.79■□□□□ 0.12
PDX1P52945 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.79■□□□□ 0.12
PDX1P52945 AL132655.2-201ENST00000596276 594 ntBASIC15.79■□□□□ 0.12
PDX1P52945 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 AL589739.1-201ENST00000607720 493 ntBASIC15.79■□□□□ 0.12
PDX1P52945 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.79■□□□□ 0.12
PDX1P52945 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PDX1P52945 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PDX1P52945 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 AC105021.1-202ENST00000570572 669 ntBASIC15.78■□□□□ 0.12
PDX1P52945 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.78■□□□□ 0.12
PDX1P52945 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 AC013467.2-201ENST00000605472 835 ntBASIC15.78■□□□□ 0.12
PDX1P52945 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.78■□□□□ 0.12
PDX1P52945 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDX1P52945 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PDX1P52945 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDX1P52945 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.77■□□□□ 0.12
PDX1P52945 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PDX1P52945 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PDX1P52945 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.77■□□□□ 0.12
PDX1P52945 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDX1P52945 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms