Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
USP11P51784 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.33■□□□□ 0.52
USP11P51784 AC079328.2-201ENST00000561241 3354 ntBASIC18.33■□□□□ 0.52
USP11P51784 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.33■□□□□ 0.52
USP11P51784 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
USP11P51784 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
USP11P51784 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 AP001282.1-201ENST00000531301 1499 ntBASIC18.33■□□□□ 0.52
USP11P51784 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP11P51784 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP11P51784 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 MIR943-201ENST00000401286 94 ntBASIC18.32■□□□□ 0.52
USP11P51784 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 AC055876.3-201ENST00000431496 288 ntBASIC18.32■□□□□ 0.52
USP11P51784 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 MTND6P24-201ENST00000440466 518 ntBASIC18.32■□□□□ 0.52
USP11P51784 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
USP11P51784 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 AL079307.3-201ENST00000556114 283 ntBASIC18.32■□□□□ 0.52
USP11P51784 AC138649.4-201ENST00000612222 287 ntBASIC18.32■□□□□ 0.52
USP11P51784 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP11P51784 DOC2GP-204ENST00000639052 2548 ntBASIC18.32■□□□□ 0.52
USP11P51784 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP11P51784 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 PCDH8P1-201ENST00000428983 2773 ntBASIC18.32■□□□□ 0.52
USP11P51784 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP11P51784 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.32■□□□□ 0.52
USP11P51784 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP11P51784 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
USP11P51784 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.32■□□□□ 0.52
USP11P51784 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 CETN4P-206ENST00000642099 2168 ntBASIC18.31■□□□□ 0.52
USP11P51784 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 CYP4F24P-201ENST00000586049 1580 ntBASIC18.31■□□□□ 0.52
USP11P51784 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
USP11P51784 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.31■□□□□ 0.52
USP11P51784 AL589739.1-201ENST00000607720 493 ntBASIC18.31■□□□□ 0.52
USP11P51784 AC073592.8-201ENST00000624126 511 ntBASIC18.31■□□□□ 0.52
USP11P51784 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP11P51784 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.31■□□□□ 0.52
USP11P51784 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP11P51784 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 KRT8P12-202ENST00000472924 1397 ntBASIC18.3■□□□□ 0.52
USP11P51784 FO538757.1-201ENST00000623083 1397 ntBASIC18.3■□□□□ 0.52
USP11P51784 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.3■□□□□ 0.52
USP11P51784 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.3■□□□□ 0.52
USP11P51784 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
USP11P51784 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms