Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.47□□□□□ -0.09
LHX2P50458 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LHX2P50458 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.47□□□□□ -0.09
LHX2P50458 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.47□□□□□ -0.09
LHX2P50458 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.47□□□□□ -0.09
LHX2P50458 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.47□□□□□ -0.09
LHX2P50458 AC002472.2-201ENST00000442739 958 ntBASIC14.47□□□□□ -0.09
LHX2P50458 FAM207CP-201ENST00000443486 507 ntBASIC14.47□□□□□ -0.09
LHX2P50458 AL512361.1-201ENST00000554200 418 ntBASIC14.47□□□□□ -0.09
LHX2P50458 AC009407.1-201ENST00000568958 598 ntBASIC14.47□□□□□ -0.09
LHX2P50458 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.47□□□□□ -0.09
LHX2P50458 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.47□□□□□ -0.09
LHX2P50458 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LHX2P50458 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 AC236430.1-201ENST00000402231 743 ntBASIC14.46□□□□□ -0.09
LHX2P50458 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.46□□□□□ -0.09
LHX2P50458 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 RN7SL618P-201ENST00000477850 296 ntBASIC14.46□□□□□ -0.09
LHX2P50458 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.46□□□□□ -0.09
LHX2P50458 ZNF890P-202ENST00000530367 1156 ntBASIC14.46□□□□□ -0.09
LHX2P50458 AC010336.2-201ENST00000564226 506 ntBASIC14.46□□□□□ -0.09
LHX2P50458 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.46□□□□□ -0.09
LHX2P50458 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.46□□□□□ -0.09
LHX2P50458 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 AL033527.5-202ENST00000641632 1098 ntBASIC14.46□□□□□ -0.09
LHX2P50458 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LHX2P50458 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.46□□□□□ -0.09
LHX2P50458 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.46□□□□□ -0.09
LHX2P50458 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
LHX2P50458 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
LHX2P50458 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
LHX2P50458 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.46□□□□□ -0.1
LHX2P50458 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LHX2P50458 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LHX2P50458 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
LHX2P50458 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LHX2P50458 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LHX2P50458 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
LHX2P50458 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
LHX2P50458 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LHX2P50458 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.45□□□□□ -0.1
LHX2P50458 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LHX2P50458 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.45□□□□□ -0.1
LHX2P50458 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LHX2P50458 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LHX2P50458 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LHX2P50458 AC004987.2-201ENST00000395959 1148 ntBASIC14.45□□□□□ -0.1
LHX2P50458 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms