Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
CX3CR1P49238 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CX3CR1P49238 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.36□□□□□ -0.11
CX3CR1P49238 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC096734.2-201ENST00000562054 433 ntBASIC14.36□□□□□ -0.11
CX3CR1P49238 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.36□□□□□ -0.11
CX3CR1P49238 Z83851.2-201ENST00000609564 659 ntBASIC14.36□□□□□ -0.11
CX3CR1P49238 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC104640.1-201ENST00000562617 2109 ntBASIC14.36□□□□□ -0.11
CX3CR1P49238 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CX3CR1P49238 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CX3CR1P49238 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.36□□□□□ -0.11
CX3CR1P49238 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.36□□□□□ -0.11
CX3CR1P49238 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
CX3CR1P49238 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CR1P49238 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC009078.2-202ENST00000463353 338 ntBASIC14.35□□□□□ -0.11
CX3CR1P49238 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CR1P49238 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.35□□□□□ -0.11
CX3CR1P49238 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC023141.13-201ENST00000604991 943 ntBASIC14.35□□□□□ -0.11
CX3CR1P49238 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC007064.4-201ENST00000637740 555 ntBASIC14.35□□□□□ -0.11
CX3CR1P49238 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CX3CR1P49238 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 AC010491.1-201ENST00000563101 2797 ntBASIC14.35□□□□□ -0.11
CX3CR1P49238 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CX3CR1P49238 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CX3CR1P49238 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
CX3CR1P49238 AL592424.1-201ENST00000563624 1536 ntBASIC14.35□□□□□ -0.11
CX3CR1P49238 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CX3CR1P49238 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CX3CR1P49238 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.34□□□□□ -0.11
CX3CR1P49238 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CR1P49238 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CR1P49238 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CR1P49238 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CR1P49238 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CX3CR1P49238 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CX3CR1P49238 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CX3CR1P49238 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CX3CR1P49238 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.34□□□□□ -0.11
CX3CR1P49238 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms