Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC1A6P48664 GGTLC5P-201ENST00000617623 998 ntBASIC16.05■□□□□ 0.16
SLC1A6P48664 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC1A6P48664 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC1A6P48664 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC1A6P48664 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.05■□□□□ 0.16
SLC1A6P48664 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC1A6P48664 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC1A6P48664 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 AC067930.6-201ENST00000623257 4947 ntBASIC16.04■□□□□ 0.16
SLC1A6P48664 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A6P48664 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SLC1A6P48664 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 FGFR3P6-201ENST00000457012 610 ntBASIC16.04■□□□□ 0.16
SLC1A6P48664 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A6P48664 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC1A6P48664 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 AL109954.1-202ENST00000564051 2148 ntBASIC16.04■□□□□ 0.16
SLC1A6P48664 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A6P48664 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A6P48664 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A6P48664 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC1A6P48664 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A6P48664 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A6P48664 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A6P48664 CICP13-201ENST00000422015 2789 ntBASIC16.03■□□□□ 0.16
SLC1A6P48664 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A6P48664 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms