Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ME1P48163 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 UNC93B6-202ENST00000528242 690 ntBASIC18.67■□□□□ 0.58
ME1P48163 AP002469.2-201ENST00000531724 424 ntBASIC18.67■□□□□ 0.58
ME1P48163 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.67■□□□□ 0.58
ME1P48163 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 AC116407.3-201ENST00000623905 1129 ntBASIC18.67■□□□□ 0.58
ME1P48163 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ME1P48163 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ME1P48163 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
ME1P48163 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ME1P48163 DBET-201ENST00000630918 3363 ntBASIC18.67■□□□□ 0.58
ME1P48163 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 FLJ16779-201ENST00000612722 7638 ntBASIC18.66■□□□□ 0.58
ME1P48163 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 CRYGEP-201ENST00000412192 528 ntBASIC18.66■□□□□ 0.58
ME1P48163 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 AC009947.1-201ENST00000444350 727 ntBASIC18.66■□□□□ 0.58
ME1P48163 FAAHP1-202ENST00000446499 1238 ntBASIC18.66■□□□□ 0.58
ME1P48163 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.66■□□□□ 0.58
ME1P48163 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.66■□□□□ 0.58
ME1P48163 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ME1P48163 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 AC092919.2-201ENST00000623631 1645 ntBASIC18.66■□□□□ 0.58
ME1P48163 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ME1P48163 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 AC144831.1-201ENST00000573312 2656 ntBASIC18.66■□□□□ 0.58
ME1P48163 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ME1P48163 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.66■□□□□ 0.58
ME1P48163 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 AC011270.2-201ENST00000624293 2550 ntBASIC18.65■□□□□ 0.58
ME1P48163 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.65■□□□□ 0.58
ME1P48163 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.65■□□□□ 0.58
ME1P48163 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
ME1P48163 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.65■□□□□ 0.58
ME1P48163 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ME1P48163 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ME1P48163 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms