Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC067750.1-201ENST00000608826 6545 ntBASIC14.11□□□□□ -0.15
CBX5P45973 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CBX5P45973 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 GRK6P1-201ENST00000400595 1711 ntBASIC14.11□□□□□ -0.15
CBX5P45973 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.11□□□□□ -0.15
CBX5P45973 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.11□□□□□ -0.15
CBX5P45973 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 LINC01238-205ENST00000567549 1107 ntBASIC14.11□□□□□ -0.15
CBX5P45973 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.11□□□□□ -0.15
CBX5P45973 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.11□□□□□ -0.15
CBX5P45973 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 AP000867.4-201ENST00000641616 219 ntBASIC14.11□□□□□ -0.15
CBX5P45973 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CBX5P45973 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 AP005117.1-202ENST00000581724 1908 ntBASIC14.11□□□□□ -0.15
CBX5P45973 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.11□□□□□ -0.15
CBX5P45973 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.11□□□□□ -0.15
CBX5P45973 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CBX5P45973 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
CBX5P45973 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.1□□□□□ -0.15
CBX5P45973 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.1□□□□□ -0.15
CBX5P45973 AC004817.3-201ENST00000602957 2129 ntBASIC14.1□□□□□ -0.15
CBX5P45973 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
CBX5P45973 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CBX5P45973 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CBX5P45973 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
CBX5P45973 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CBX5P45973 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.09□□□□□ -0.15
CBX5P45973 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.09□□□□□ -0.15
CBX5P45973 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.09□□□□□ -0.15
CBX5P45973 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CBX5P45973 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.09□□□□□ -0.15
CBX5P45973 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.09□□□□□ -0.15
CBX5P45973 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.09□□□□□ -0.15
CBX5P45973 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.09□□□□□ -0.15
CBX5P45973 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms