Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.42■□□□□ 0.38
SSR1P43307 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
SSR1P43307 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSR1P43307 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 AL513480.1-201ENST00000451731 511 ntBASIC17.41■□□□□ 0.38
SSR1P43307 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 OR7E47P-204ENST00000575924 449 ntBASIC17.41■□□□□ 0.38
SSR1P43307 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 MIR7706-201ENST00000613747 67 ntBASIC17.41■□□□□ 0.38
SSR1P43307 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SSR1P43307 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SSR1P43307 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.41■□□□□ 0.38
SSR1P43307 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR1P43307 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR1P43307 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR1P43307 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.4■□□□□ 0.38
SSR1P43307 MRPL3P1-201ENST00000400109 1033 ntBASIC17.4■□□□□ 0.38
SSR1P43307 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.4■□□□□ 0.38
SSR1P43307 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 CXCL1P1-201ENST00000502804 216 ntBASIC17.4■□□□□ 0.38
SSR1P43307 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.4■□□□□ 0.38
SSR1P43307 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR1P43307 AC116407.3-201ENST00000623905 1129 ntBASIC17.4■□□□□ 0.38
SSR1P43307 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSR1P43307 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR1P43307 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR1P43307 AL596087.1-201ENST00000400979 1969 ntBASIC17.4■□□□□ 0.38
SSR1P43307 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR1P43307 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.39■□□□□ 0.38
SSR1P43307 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SSR1P43307 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSR1P43307 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR1P43307 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR1P43307 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.39■□□□□ 0.37
SSR1P43307 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSR1P43307 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms