Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC23.91■■□□□ 1.42
KDM5CP41229 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM5CP41229 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
KDM5CP41229 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
KDM5CP41229 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 LINC01144-201ENST00000626198 1710 ntBASIC23.91■■□□□ 1.42
KDM5CP41229 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
KDM5CP41229 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC23.91■■□□□ 1.42
KDM5CP41229 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC23.91■■□□□ 1.42
KDM5CP41229 KRT18P43-201ENST00000469825 1281 ntBASIC23.91■■□□□ 1.42
KDM5CP41229 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KDM5CP41229 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC23.91■■□□□ 1.42
KDM5CP41229 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC23.91■■□□□ 1.42
KDM5CP41229 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM5CP41229 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.9■■□□□ 1.42
KDM5CP41229 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC23.9■■□□□ 1.42
KDM5CP41229 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
KDM5CP41229 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KDM5CP41229 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC23.9■■□□□ 1.42
KDM5CP41229 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC23.9■■□□□ 1.42
KDM5CP41229 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM5CP41229 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC23.9■■□□□ 1.42
KDM5CP41229 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
KDM5CP41229 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
KDM5CP41229 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC23.89■■□□□ 1.42
KDM5CP41229 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
KDM5CP41229 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC23.89■■□□□ 1.42
KDM5CP41229 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KDM5CP41229 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
KDM5CP41229 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
KDM5CP41229 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.89■■□□□ 1.41
KDM5CP41229 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC23.89■■□□□ 1.41
KDM5CP41229 SLC25A24P2-201ENST00000415059 510 ntBASIC23.89■■□□□ 1.41
KDM5CP41229 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC23.89■■□□□ 1.41
KDM5CP41229 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC23.89■■□□□ 1.41
KDM5CP41229 AL591846.1-201ENST00000451736 433 ntBASIC23.89■■□□□ 1.41
KDM5CP41229 AC026410.3-201ENST00000514280 936 ntBASIC23.89■■□□□ 1.41
KDM5CP41229 SCARNA20.5-201ENST00000516991 142 ntBASIC23.89■■□□□ 1.41
KDM5CP41229 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC23.89■■□□□ 1.41
KDM5CP41229 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC23.89■■□□□ 1.41
KDM5CP41229 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KDM5CP41229 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC23.89■■□□□ 1.41
KDM5CP41229 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC23.89■■□□□ 1.41
KDM5CP41229 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC23.89■■□□□ 1.41
KDM5CP41229 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
KDM5CP41229 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
KDM5CP41229 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC23.88■■□□□ 1.41
KDM5CP41229 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 AC015910.1-201ENST00000579400 975 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 AC015967.2-201ENST00000624092 234 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 AC006435.4-201ENST00000625037 234 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 AL356737.1-201ENST00000634391 234 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM5CP41229 BNIP3P1-202ENST00000550043 1585 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 AL607033.1-201ENST00000623900 1599 ntBASIC23.88■■□□□ 1.41
KDM5CP41229 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
KDM5CP41229 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC23.88■■□□□ 1.41
KDM5CP41229 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KDM5CP41229 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KDM5CP41229 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC23.87■■□□□ 1.41
KDM5CP41229 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms