Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 AC112504.1-201ENST00000623415 1841 ntBASIC18.37■□□□□ 0.53
PRPHP41219 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 LINC02447-202ENST00000501888 2146 ntBASIC18.37■□□□□ 0.53
PRPHP41219 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PRPHP41219 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPHP41219 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPHP41219 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
PRPHP41219 AC010327.4-202ENST00000591484 748 ntBASIC18.37■□□□□ 0.53
PRPHP41219 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPHP41219 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPHP41219 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPHP41219 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.36■□□□□ 0.53
PRPHP41219 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.36■□□□□ 0.53
PRPHP41219 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPHP41219 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRPHP41219 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRPHP41219 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPHP41219 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPHP41219 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 HLA-H-201ENST00000383620 1096 ntBASIC18.35■□□□□ 0.53
PRPHP41219 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 AP000344.2-201ENST00000512987 629 ntBASIC18.35■□□□□ 0.53
PRPHP41219 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPHP41219 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPHP41219 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPHP41219 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 AC055717.3-201ENST00000622967 595 ntBASIC18.35■□□□□ 0.53
PRPHP41219 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPHP41219 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPHP41219 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms