Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.32□□□□□ -0.28
CEACAM3P40198 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.32□□□□□ -0.28
CEACAM3P40198 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.32□□□□□ -0.28
CEACAM3P40198 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.32□□□□□ -0.28
CEACAM3P40198 SNHG9-202ENST00000564014 471 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 AC027307.2-201ENST00000591252 911 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AC004835.2-201ENST00000603762 682 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AL365330.1-201ENST00000607459 531 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AC055717.3-201ENST00000622967 595 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 AC005622.1-201ENST00000636801 1703 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.32□□□□□ -0.28
CEACAM3P40198 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CEACAM3P40198 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC254562.1-201ENST00000417586 456 ntBASIC13.31□□□□□ -0.28
CEACAM3P40198 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC093724.1-201ENST00000448659 1027 ntBASIC13.31□□□□□ -0.28
CEACAM3P40198 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC004967.1-201ENST00000453589 447 ntBASIC13.31□□□□□ -0.28
CEACAM3P40198 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.31□□□□□ -0.28
CEACAM3P40198 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.31□□□□□ -0.28
CEACAM3P40198 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.31□□□□□ -0.28
CEACAM3P40198 AC024267.1-201ENST00000582320 895 ntBASIC13.31□□□□□ -0.28
CEACAM3P40198 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.31□□□□□ -0.28
CEACAM3P40198 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.31□□□□□ -0.28
CEACAM3P40198 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CEACAM3P40198 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 AC092171.3-201ENST00000610122 2651 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 UXT-AS1-201ENST00000590504 1525 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms