Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GDNFP39905 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.24□□□□□ -0.13
GDNFP39905 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 DUSP5P1-201ENST00000441325 1139 ntBASIC14.24□□□□□ -0.13
GDNFP39905 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
GDNFP39905 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 IFNL4P1-201ENST00000607083 540 ntBASIC14.24□□□□□ -0.13
GDNFP39905 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.24□□□□□ -0.13
GDNFP39905 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 AC136621.1-201ENST00000624017 2304 ntBASIC14.24□□□□□ -0.13
GDNFP39905 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GDNFP39905 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GDNFP39905 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
GDNFP39905 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 SNX18-202ENST00000343017 3140 ntBASIC14.23□□□□□ -0.13
GDNFP39905 AL161772.1-201ENST00000610494 4412 ntBASIC14.23□□□□□ -0.13
GDNFP39905 AL031731.1-201ENST00000642131 2094 ntBASIC14.23□□□□□ -0.13
GDNFP39905 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.23□□□□□ -0.13
GDNFP39905 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.23□□□□□ -0.13
GDNFP39905 MTDHP3-201ENST00000594186 672 ntBASIC14.23□□□□□ -0.13
GDNFP39905 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.23□□□□□ -0.13
GDNFP39905 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 AC073592.4-201ENST00000623827 446 ntBASIC14.23□□□□□ -0.13
GDNFP39905 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.23□□□□□ -0.13
GDNFP39905 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.23□□□□□ -0.13
GDNFP39905 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.23□□□□□ -0.13
GDNFP39905 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GDNFP39905 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 SIGLEC16-201ENST00000599858 1437 ntBASIC14.23□□□□□ -0.13
GDNFP39905 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms