Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 AC068418.2-201ENST00000577309 3703 ntBASIC17.86■□□□□ 0.45
KRT9P35527 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 RNA5SP415-201ENST00000517246 115 ntBASIC17.86■□□□□ 0.45
KRT9P35527 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT9P35527 IGHV3-22-201ENST00000520721 359 ntBASIC17.86■□□□□ 0.45
KRT9P35527 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT9P35527 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT9P35527 AP003680.1-201ENST00000598970 3660 ntBASIC17.86■□□□□ 0.45
KRT9P35527 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 AC013268.4-201ENST00000637413 2228 ntBASIC17.86■□□□□ 0.45
KRT9P35527 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT9P35527 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT9P35527 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
KRT9P35527 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
KRT9P35527 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT9P35527 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT9P35527 AC009947.1-201ENST00000444350 727 ntBASIC17.85■□□□□ 0.45
KRT9P35527 AC079776.4-201ENST00000511039 504 ntBASIC17.85■□□□□ 0.45
KRT9P35527 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.85■□□□□ 0.45
KRT9P35527 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT9P35527 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT9P35527 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.85■□□□□ 0.45
KRT9P35527 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.85■□□□□ 0.45
KRT9P35527 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KRT9P35527 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KRT9P35527 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 CRYGEP-201ENST00000412192 528 ntBASIC17.84■□□□□ 0.45
KRT9P35527 FAM185BP-201ENST00000443595 716 ntBASIC17.84■□□□□ 0.45
KRT9P35527 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.84■□□□□ 0.45
KRT9P35527 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 AL121894.2-201ENST00000602977 491 ntBASIC17.84■□□□□ 0.45
KRT9P35527 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT9P35527 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT9P35527 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT9P35527 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT9P35527 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms