Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS4P35443 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
THBS4P35443 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS4P35443 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.37□□□□□ -0.11
THBS4P35443 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS4P35443 AL365203.3-201ENST00000609742 2057 ntBASIC14.37□□□□□ -0.11
THBS4P35443 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
THBS4P35443 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
THBS4P35443 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
THBS4P35443 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 AP000344.2-201ENST00000512987 629 ntBASIC14.36□□□□□ -0.11
THBS4P35443 KRT8P48-201ENST00000515599 1220 ntBASIC14.36□□□□□ -0.11
THBS4P35443 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
THBS4P35443 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 RARRES2P8-201ENST00000566335 367 ntBASIC14.36□□□□□ -0.11
THBS4P35443 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.36□□□□□ -0.11
THBS4P35443 AL513210.1-201ENST00000629608 234 ntBASIC14.36□□□□□ -0.11
THBS4P35443 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS4P35443 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
THBS4P35443 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
THBS4P35443 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS4P35443 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
THBS4P35443 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS4P35443 AC004461.1-201ENST00000412461 403 ntBASIC14.35□□□□□ -0.11
THBS4P35443 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS4P35443 AL135744.1-201ENST00000565098 629 ntBASIC14.35□□□□□ -0.11
THBS4P35443 MIR3909-201ENST00000579518 119 ntBASIC14.35□□□□□ -0.11
THBS4P35443 AC022145.2-201ENST00000598203 171 ntBASIC14.35□□□□□ -0.11
THBS4P35443 AC004835.2-201ENST00000603762 682 ntBASIC14.35□□□□□ -0.11
THBS4P35443 AC020765.3-201ENST00000613051 740 ntBASIC14.35□□□□□ -0.11
THBS4P35443 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS4P35443 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS4P35443 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.35□□□□□ -0.11
THBS4P35443 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms