Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC8P31273 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC8P31273 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 AL450472.2-201ENST00000603663 1156 ntBASIC17.51■□□□□ 0.39
HOXC8P31273 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC8P31273 AC092171.3-201ENST00000610122 2651 ntBASIC17.51■□□□□ 0.39
HOXC8P31273 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXC8P31273 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC8P31273 FLJ38576-201ENST00000623820 2459 ntBASIC17.5■□□□□ 0.39
HOXC8P31273 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 INTS4P2-202ENST00000614726 2019 ntBASIC17.5■□□□□ 0.39
HOXC8P31273 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXC8P31273 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXC8P31273 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.5■□□□□ 0.39
HOXC8P31273 AC022494.1-201ENST00000466044 728 ntBASIC17.5■□□□□ 0.39
HOXC8P31273 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXC8P31273 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC8P31273 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXC8P31273 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HOXC8P31273 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HOXC8P31273 AC005332.8-201ENST00000622750 2735 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HOXC8P31273 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 AGGF1P2-201ENST00000426656 2106 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 KRT43P-201ENST00000434019 910 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 AC104989.1-201ENST00000519711 778 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 AC133552.6-201ENST00000613406 534 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXC8P31273 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 AC022211.2-201ENST00000585075 2527 ntBASIC17.49■□□□□ 0.39
HOXC8P31273 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXC8P31273 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXC8P31273 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.48■□□□□ 0.39
HOXC8P31273 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC8P31273 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC8P31273 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC8P31273 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms