Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTGFP29279 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
CTGFP29279 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTGFP29279 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 FXNP2-201ENST00000411625 547 ntBASIC18.03■□□□□ 0.48
CTGFP29279 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.03■□□□□ 0.48
CTGFP29279 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 BX284668.4-201ENST00000453917 508 ntBASIC18.03■□□□□ 0.48
CTGFP29279 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
CTGFP29279 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.03■□□□□ 0.48
CTGFP29279 MIR6727-201ENST00000620702 65 ntBASIC18.03■□□□□ 0.48
CTGFP29279 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTGFP29279 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
CTGFP29279 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTGFP29279 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CTGFP29279 AC018735.1-201ENST00000437208 1502 ntBASIC18.03■□□□□ 0.48
CTGFP29279 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CTGFP29279 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.02■□□□□ 0.48
CTGFP29279 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CTGFP29279 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.48
CTGFP29279 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CTGFP29279 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 AC091046.1-201ENST00000331871 207 ntBASIC18.02■□□□□ 0.48
CTGFP29279 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CTGFP29279 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.02■□□□□ 0.48
CTGFP29279 BTBD6P1-201ENST00000412176 1267 ntBASIC18.02■□□□□ 0.48
CTGFP29279 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.02■□□□□ 0.48
CTGFP29279 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CTGFP29279 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.02■□□□□ 0.48
CTGFP29279 RPSAP36-202ENST00000494591 1261 ntBASIC18.02■□□□□ 0.48
CTGFP29279 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.02■□□□□ 0.48
CTGFP29279 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 AP006547.1-201ENST00000563435 692 ntBASIC18.02■□□□□ 0.48
CTGFP29279 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.02■□□□□ 0.48
CTGFP29279 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.02■□□□□ 0.48
CTGFP29279 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.02■□□□□ 0.48
CTGFP29279 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 AC244452.3-201ENST00000636814 210 ntBASIC18.02■□□□□ 0.48
CTGFP29279 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTGFP29279 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CTGFP29279 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CTGFP29279 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CTGFP29279 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
CTGFP29279 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTGFP29279 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.01■□□□□ 0.47
CTGFP29279 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.01■□□□□ 0.47
CTGFP29279 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CTGFP29279 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 ACKR1-201ENST00000368121 1240 ntBASIC18.01■□□□□ 0.47
CTGFP29279 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.01■□□□□ 0.47
CTGFP29279 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.01■□□□□ 0.47
CTGFP29279 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.01■□□□□ 0.47
CTGFP29279 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 AC026410.3-201ENST00000514280 936 ntBASIC18.01■□□□□ 0.47
CTGFP29279 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 CHMP4BP1-201ENST00000556017 588 ntBASIC18.01■□□□□ 0.47
CTGFP29279 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.01■□□□□ 0.47
CTGFP29279 AC000095.1-201ENST00000603208 874 ntBASIC18.01■□□□□ 0.47
CTGFP29279 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CTGFP29279 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.01■□□□□ 0.47
CTGFP29279 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.01■□□□□ 0.47
CTGFP29279 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTGFP29279 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.01■□□□□ 0.47
CTGFP29279 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
CTGFP29279 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms