Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.85■□□□□ 0.93
RXRBP28702 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.85■□□□□ 0.93
RXRBP28702 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 AL139008.1-201ENST00000437894 228 ntBASIC20.85■□□□□ 0.93
RXRBP28702 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.85■□□□□ 0.93
RXRBP28702 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.85■□□□□ 0.93
RXRBP28702 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.85■□□□□ 0.93
RXRBP28702 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.85■□□□□ 0.93
RXRBP28702 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RXRBP28702 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 AL512652.2-201ENST00000625156 1716 ntBASIC20.84■□□□□ 0.93
RXRBP28702 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 U82695.1-201ENST00000635752 1889 ntBASIC20.84■□□□□ 0.93
RXRBP28702 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRBP28702 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRBP28702 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RXRBP28702 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 TPM3P8-201ENST00000330554 643 ntBASIC20.84■□□□□ 0.93
RXRBP28702 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 AL353637.1-201ENST00000451571 732 ntBASIC20.84■□□□□ 0.93
RXRBP28702 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.84■□□□□ 0.93
RXRBP28702 AL022344.2-201ENST00000568976 968 ntBASIC20.84■□□□□ 0.93
RXRBP28702 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 RN7SL596P-201ENST00000582123 288 ntBASIC20.84■□□□□ 0.93
RXRBP28702 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RXRBP28702 AC107373.2-201ENST00000607735 490 ntBASIC20.84■□□□□ 0.93
RXRBP28702 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRBP28702 AL691432.1-201ENST00000596308 1422 ntBASIC20.84■□□□□ 0.93
RXRBP28702 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRBP28702 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 DPM3-202ENST00000368399 517 ntBASIC20.83■□□□□ 0.93
RXRBP28702 AL512430.1-201ENST00000392575 860 ntBASIC20.83■□□□□ 0.93
RXRBP28702 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.83■□□□□ 0.93
RXRBP28702 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.83■□□□□ 0.93
RXRBP28702 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.83■□□□□ 0.93
RXRBP28702 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RXRBP28702 AL805961.1-203ENST00000641078 1258 ntBASIC20.83■□□□□ 0.93
RXRBP28702 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRBP28702 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.83■□□□□ 0.93
RXRBP28702 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RXRBP28702 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.83■□□□□ 0.92
RXRBP28702 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RXRBP28702 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RXRBP28702 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.83■□□□□ 0.92
RXRBP28702 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.83■□□□□ 0.92
RXRBP28702 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.83■□□□□ 0.92
RXRBP28702 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RXRBP28702 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RXRBP28702 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RXRBP28702 GPAA1P2-202ENST00000606848 1787 ntBASIC20.82■□□□□ 0.92
RXRBP28702 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRBP28702 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRBP28702 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 RPL7P35-201ENST00000446943 740 ntBASIC20.82■□□□□ 0.92
RXRBP28702 RPL18P13-201ENST00000478088 569 ntBASIC20.82■□□□□ 0.92
RXRBP28702 AC106794.1-201ENST00000506935 792 ntBASIC20.82■□□□□ 0.92
RXRBP28702 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.82■□□□□ 0.92
RXRBP28702 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RXRBP28702 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRBP28702 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRBP28702 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRBP28702 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRBP28702 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms