Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 AC134407.2-201ENST00000625089 1978 ntBASIC19.59■□□□□ 0.73
CHMLP26374 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHMLP26374 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMLP26374 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHMLP26374 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CHMLP26374 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CHMLP26374 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHMLP26374 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.58■□□□□ 0.73
CHMLP26374 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMLP26374 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.58■□□□□ 0.73
CHMLP26374 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMLP26374 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.58■□□□□ 0.72
CHMLP26374 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMLP26374 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMLP26374 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.58■□□□□ 0.72
CHMLP26374 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMLP26374 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 AC084121.4-201ENST00000641598 221 ntBASIC19.58■□□□□ 0.72
CHMLP26374 AF228730.8-201ENST00000642140 221 ntBASIC19.58■□□□□ 0.72
CHMLP26374 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMLP26374 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMLP26374 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMLP26374 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.58■□□□□ 0.72
CHMLP26374 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHMLP26374 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMLP26374 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CHMLP26374 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMLP26374 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMLP26374 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHMLP26374 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMLP26374 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMLP26374 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMLP26374 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMLP26374 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 TIMM8BP1-201ENST00000452384 211 ntBASIC19.57■□□□□ 0.72
CHMLP26374 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.57■□□□□ 0.72
CHMLP26374 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMLP26374 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.57■□□□□ 0.72
CHMLP26374 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMLP26374 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMLP26374 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMLP26374 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CHMLP26374 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMLP26374 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMLP26374 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHMLP26374 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHMLP26374 ELL2P1-201ENST00000413990 1906 ntBASIC19.57■□□□□ 0.72
CHMLP26374 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CHMLP26374 AC011477.6-201ENST00000604980 1927 ntBASIC19.57■□□□□ 0.72
CHMLP26374 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMLP26374 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMLP26374 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHMLP26374 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMLP26374 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 FAM220BP-201ENST00000377689 816 ntBASIC19.56■□□□□ 0.72
CHMLP26374 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 AC069335.1-201ENST00000489972 472 ntBASIC19.56■□□□□ 0.72
CHMLP26374 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMLP26374 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMLP26374 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMLP26374 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMLP26374 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMLP26374 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMLP26374 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMLP26374 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHMLP26374 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMLP26374 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms