Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 AC138761.1-201ENST00000584393 385 ntBASIC13.75□□□□□ -0.21
COL8A2P25067 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.75□□□□□ -0.21
COL8A2P25067 SPDYE12P-201ENST00000618416 771 ntBASIC13.75□□□□□ -0.21
COL8A2P25067 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
COL8A2P25067 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COL8A2P25067 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 GGT3P-204ENST00000453783 1664 ntBASIC13.75□□□□□ -0.21
COL8A2P25067 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COL8A2P25067 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COL8A2P25067 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 AC100757.3-201ENST00000622361 1406 ntBASIC13.74□□□□□ -0.21
COL8A2P25067 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.74□□□□□ -0.21
COL8A2P25067 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.74□□□□□ -0.21
COL8A2P25067 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 LINC01144-201ENST00000626198 1710 ntBASIC13.74□□□□□ -0.21
COL8A2P25067 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
COL8A2P25067 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 BANF1P1-201ENST00000553684 263 ntBASIC13.74□□□□□ -0.21
COL8A2P25067 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.74□□□□□ -0.21
COL8A2P25067 AC024267.1-201ENST00000582320 895 ntBASIC13.74□□□□□ -0.21
COL8A2P25067 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 AL589739.1-201ENST00000607720 493 ntBASIC13.74□□□□□ -0.21
COL8A2P25067 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
COL8A2P25067 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.74□□□□□ -0.21
COL8A2P25067 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.74□□□□□ -0.21
COL8A2P25067 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.74□□□□□ -0.21
COL8A2P25067 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL8A2P25067 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL8A2P25067 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.73□□□□□ -0.21
COL8A2P25067 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.73□□□□□ -0.21
COL8A2P25067 AC236430.1-201ENST00000402231 743 ntBASIC13.73□□□□□ -0.21
COL8A2P25067 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.73□□□□□ -0.21
COL8A2P25067 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.73□□□□□ -0.21
COL8A2P25067 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.73□□□□□ -0.21
COL8A2P25067 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.73□□□□□ -0.21
COL8A2P25067 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 RN7SL204P-201ENST00000582831 262 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms