Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CAPN3P20807 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CAPN3P20807 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 YBX2P1-201ENST00000394192 760 ntBASIC15.72■□□□□ 0.11
CAPN3P20807 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.72■□□□□ 0.11
CAPN3P20807 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 KRT18P3-201ENST00000451602 1288 ntBASIC15.72■□□□□ 0.11
CAPN3P20807 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CAPN3P20807 FGFR3P6-201ENST00000457012 610 ntBASIC15.72■□□□□ 0.11
CAPN3P20807 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.72■□□□□ 0.11
CAPN3P20807 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.72■□□□□ 0.11
CAPN3P20807 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
CAPN3P20807 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CAPN3P20807 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CAPN3P20807 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CAPN3P20807 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.72■□□□□ 0.11
CAPN3P20807 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 TNRC18P2-201ENST00000417666 2714 ntBASIC15.71■□□□□ 0.11
CAPN3P20807 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CAPN3P20807 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CAPN3P20807 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.71■□□□□ 0.11
CAPN3P20807 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 AC005412.3-201ENST00000580309 715 ntBASIC15.71■□□□□ 0.11
CAPN3P20807 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CAPN3P20807 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.71■□□□□ 0.11
CAPN3P20807 AP001350.2-201ENST00000625104 1094 ntBASIC15.71■□□□□ 0.11
CAPN3P20807 PGM5P2-202ENST00000637225 1043 ntBASIC15.71■□□□□ 0.11
CAPN3P20807 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CAPN3P20807 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CAPN3P20807 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
CAPN3P20807 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CAPN3P20807 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.71■□□□□ 0.1
CAPN3P20807 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
CAPN3P20807 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.71■□□□□ 0.1
CAPN3P20807 AC005622.1-201ENST00000636801 1703 ntBASIC15.71■□□□□ 0.1
CAPN3P20807 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CAPN3P20807 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CAPN3P20807 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPN3P20807 AP003680.1-201ENST00000598970 3660 ntBASIC15.71■□□□□ 0.1
CAPN3P20807 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CAPN3P20807 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CAPN3P20807 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms