Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 AC016027.1-202ENST00000607927 1699 ntBASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.16■□□□□ 0.02
TNFRSF1BP20333 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.16■□□□□ 0.02
TNFRSF1BP20333 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 AC148477.8-201ENST00000624298 468 ntBASIC15.16■□□□□ 0.02
TNFRSF1BP20333 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 AL513477.1-201ENST00000602865 2407 ntBASIC15.16■□□□□ 0.02
TNFRSF1BP20333 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
TNFRSF1BP20333 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 AC136621.1-201ENST00000624017 2304 ntBASIC15.15■□□□□ 0.02
TNFRSF1BP20333 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 RNU1-129P-201ENST00000384064 167 ntBASIC15.15■□□□□ 0.02
TNFRSF1BP20333 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 HMGA1P7-201ENST00000406908 502 ntBASIC15.15■□□□□ 0.02
TNFRSF1BP20333 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 U1.21-201ENST00000580816 167 ntBASIC15.15■□□□□ 0.02
TNFRSF1BP20333 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.15■□□□□ 0.02
TNFRSF1BP20333 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNFRSF1BP20333 CICP13-201ENST00000422015 2789 ntBASIC15.14■□□□□ 0.01
TNFRSF1BP20333 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms