Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 AC254562.1-201ENST00000417586 456 ntBASIC17.5■□□□□ 0.39
CD58P19256 AC142381.1-201ENST00000426099 345 ntBASIC17.5■□□□□ 0.39
CD58P19256 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 AL589702.1-201ENST00000641229 1509 ntBASIC17.5■□□□□ 0.39
CD58P19256 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.5■□□□□ 0.39
CD58P19256 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD58P19256 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.5■□□□□ 0.39
CD58P19256 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.49■□□□□ 0.39
CD58P19256 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CD58P19256 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
CD58P19256 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 AL627223.1-201ENST00000416693 442 ntBASIC17.49■□□□□ 0.39
CD58P19256 KRT18P32-201ENST00000424695 1287 ntBASIC17.49■□□□□ 0.39
CD58P19256 FAM58DP-201ENST00000428076 619 ntBASIC17.49■□□□□ 0.39
CD58P19256 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CD58P19256 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 KRT8P23-201ENST00000560090 1207 ntBASIC17.49■□□□□ 0.39
CD58P19256 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.49■□□□□ 0.39
CD58P19256 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD58P19256 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CD58P19256 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CD58P19256 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD58P19256 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
CD58P19256 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.49■□□□□ 0.39
CD58P19256 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.48■□□□□ 0.39
CD58P19256 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 AL592424.1-201ENST00000563624 1536 ntBASIC17.48■□□□□ 0.39
CD58P19256 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 MIR346-201ENST00000362234 95 ntBASIC17.48■□□□□ 0.39
CD58P19256 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.48■□□□□ 0.39
CD58P19256 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.48■□□□□ 0.39
CD58P19256 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
CD58P19256 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.48■□□□□ 0.39
CD58P19256 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CD58P19256 SPTSSB-204ENST00000617024 1292 ntBASIC17.48■□□□□ 0.39
CD58P19256 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CD58P19256 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CD58P19256 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.48■□□□□ 0.39
CD58P19256 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms